StartDate: 2022-07-22 11:05:05+00:00 CpuId: 32x AMD (unknown model) [Zen 3], 7nm CommitSHA: a713c85bc9528546950c735172cfe5d38cd17865 CommitTime: 2022-07-22 10:07:26 +0200 CommitAuthor: abussy CommitSubject: RI-RPA| Allow for XC correction in ADMM RI-RPA Populating docker build cache... done. #################### Building Image cp2k-manual #################### Dockerfile: /tools/docker/Dockerfile.test_manual Build-Path: / Build-Args: GIT_COMMIT_SHA=a713c85bc9528546950c735172cfe5d38cd17865 Sending build context to Docker daemon 364.2MB Step 1/44 : FROM ubuntu:22.04 22.04: Pulling from library/ubuntu 405f018f9d1d: Already exists Digest: sha256:b6b83d3c331794420340093eb706a6f152d9c1fa51b262d9bf34594887c2c7ac Status: Downloaded newer image for ubuntu:22.04 ---> 27941809078c Step 2/44 : WORKDIR /opt/cp2k-toolchain ---> Using cache ---> f46bddcc400e Step 3/44 : COPY ./tools/toolchain/install_requirements*.sh ./ ---> Using cache ---> 204d86b0facb Step 4/44 : RUN ./install_requirements.sh ubuntu:22.04 ---> Using cache ---> b31c08690dab Step 5/44 : RUN mkdir scripts ---> Using cache ---> 7572b646b1f0 Step 6/44 : COPY ./tools/toolchain/scripts/VERSION ./tools/toolchain/scripts/parse_if.py ./tools/toolchain/scripts/tool_kit.sh ./tools/toolchain/scripts/common_vars.sh ./tools/toolchain/scripts/signal_trap.sh ./tools/toolchain/scripts/get_openblas_arch.sh ./scripts/ ---> Using cache ---> ea203a2842aa Step 7/44 : COPY ./tools/toolchain/install_cp2k_toolchain.sh . ---> Using cache ---> 60d26444bf48 Step 8/44 : RUN ./install_cp2k_toolchain.sh --install-all --mpi-mode=mpich --with-gcc=system --dry-run ---> Using cache ---> d914a80e25d5 Step 9/44 : COPY ./tools/toolchain/scripts/stage0/ ./scripts/stage0/ ---> Using cache ---> c84aaa9735c6 Step 10/44 : RUN ./scripts/stage0/install_stage0.sh && rm -rf ./build ---> Using cache ---> f053e9d616a4 Step 11/44 : COPY ./tools/toolchain/scripts/stage1/ ./scripts/stage1/ ---> Using cache ---> d7a569a48391 Step 12/44 : RUN ./scripts/stage1/install_stage1.sh && rm -rf ./build ---> Using cache ---> b444a93a572b Step 13/44 : COPY ./tools/toolchain/scripts/stage2/ ./scripts/stage2/ ---> Using cache ---> ccf8b6b8c5f7 Step 14/44 : RUN ./scripts/stage2/install_stage2.sh && rm -rf ./build ---> Using cache ---> 57b1e985679b Step 15/44 : COPY ./tools/toolchain/scripts/stage3/ ./scripts/stage3/ ---> Using cache ---> 68181172d8f4 Step 16/44 : RUN ./scripts/stage3/install_stage3.sh && rm -rf ./build ---> Using cache ---> 35471c6029fb Step 17/44 : COPY ./tools/toolchain/scripts/stage4/ ./scripts/stage4/ ---> Using cache ---> 62a3467fec6f Step 18/44 : RUN ./scripts/stage4/install_stage4.sh && rm -rf ./build ---> Using cache ---> 95a952c8c807 Step 19/44 : COPY ./tools/toolchain/scripts/stage5/ ./scripts/stage5/ ---> Using cache ---> 2e61f891acaf Step 20/44 : RUN ./scripts/stage5/install_stage5.sh && rm -rf ./build ---> Using cache ---> bbbd335b6070 Step 21/44 : COPY ./tools/toolchain/scripts/stage6/ ./scripts/stage6/ ---> Using cache ---> 3187466706cb Step 22/44 : RUN ./scripts/stage6/install_stage6.sh && rm -rf ./build ---> Using cache ---> 44741f3a9769 Step 23/44 : COPY ./tools/toolchain/scripts/stage7/ ./scripts/stage7/ ---> Using cache ---> 3caf56ec100a Step 24/44 : RUN ./scripts/stage7/install_stage7.sh && rm -rf ./build ---> Using cache ---> 82668dee0f12 Step 25/44 : COPY ./tools/toolchain/scripts/stage8/ ./scripts/stage8/ ---> Using cache ---> 311b80676ea8 Step 26/44 : RUN ./scripts/stage8/install_stage8.sh && rm -rf ./build ---> Using cache ---> d623b41adf62 Step 27/44 : COPY ./tools/toolchain/scripts/arch_base.tmpl ./tools/toolchain/scripts/generate_arch_files.sh ./scripts/ ---> Using cache ---> 9b56d109c0da Step 28/44 : RUN ./scripts/generate_arch_files.sh && rm -rf ./build ---> Using cache ---> 38c8419b5572 Step 29/44 : WORKDIR /opt/cp2k ---> Using cache ---> 0a892abc64f0 Step 30/44 : ARG GIT_COMMIT_SHA ---> Running in 941256bc3680 Removing intermediate container 941256bc3680 ---> f3e5a8f9a317 Step 31/44 : COPY ./Makefile . ---> 5edb7dfaf9cb Step 32/44 : COPY ./src ./src ---> e90510344ede Step 33/44 : COPY ./exts ./exts ---> fed42b709e56 Step 34/44 : COPY ./tools/build_utils ./tools/build_utils ---> a7b411cb34f8 Step 35/44 : RUN /bin/bash -c " if [ -n "${GIT_COMMIT_SHA}" ] ; then echo "git:\${GIT_COMMIT_SHA::7}" > REVISION; fi && mkdir -p arch && ln -vs /opt/cp2k-toolchain/install/arch/local.psmp ./arch/ && echo 'Compiling cp2k...' && source /opt/cp2k-toolchain/install/setup && ( make -j ARCH=local VERSION=psmp &> /dev/null || true ) && ( [ ! -f ./exe/local/cp2k.psmp ] || ldd ./exe/local/cp2k.psmp | grep -q libmpi )" ---> Running in bf9870f96994 './arch/local.psmp' -> '/opt/cp2k-toolchain/install/arch/local.psmp' Compiling cp2k... Removing intermediate container bf9870f96994 ---> e3ff64351002 Step 36/44 : COPY ./data ./data ---> 0e85f13de74f Step 37/44 : COPY ./tests ./tests ---> ddac8a9a7261 Step 38/44 : COPY ./tools/regtesting ./tools/regtesting ---> 17f27e2b5952 Step 39/44 : COPY ./tools/manual ./tools/manual ---> 1c324f27c47e Step 40/44 : COPY ./tools/input_editing ./tools/input_editing ---> ccdcd7e068b3 Step 41/44 : COPY ./tools/docker/scripts/test_manual.sh . ---> ae2bd8c6c8d8 Step 42/44 : RUN ./test_manual.sh 2>&1 | tee report.log ---> Running in dabc6d38da05 ========== Compiling CP2K ========== Compiling cp2k... done. ========== Installing Dependencies ========== debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libdbus-1-3:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13428 files and directories currently installed.) Preparing to unpack .../00-libdbus-1-3_1.12.20-2ubuntu4_amd64.deb ... Unpacking libdbus-1-3:amd64 (1.12.20-2ubuntu4) ... Selecting previously unselected package ucf. Preparing to unpack .../01-ucf_3.0043_all.deb ... Moving old data out of the way Unpacking ucf (3.0043) ... Selecting previously unselected package libpng16-16:amd64. Preparing to unpack .../02-libpng16-16_1.6.37-3build5_amd64.deb ... Unpacking libpng16-16:amd64 (1.6.37-3build5) ... Selecting previously unselected package java-common. Preparing to unpack .../03-java-common_0.72build2_all.deb ... Unpacking java-common (0.72build2) ... Selecting previously unselected package libavahi-common-data:amd64. Preparing to unpack .../04-libavahi-common-data_0.8-5ubuntu5_amd64.deb ... Unpacking libavahi-common-data:amd64 (0.8-5ubuntu5) ... Selecting previously unselected package libavahi-common3:amd64. Preparing to unpack .../05-libavahi-common3_0.8-5ubuntu5_amd64.deb ... Unpacking libavahi-common3:amd64 (0.8-5ubuntu5) ... Selecting previously unselected package libavahi-client3:amd64. Preparing to unpack .../06-libavahi-client3_0.8-5ubuntu5_amd64.deb ... Unpacking libavahi-client3:amd64 (0.8-5ubuntu5) ... Selecting previously unselected package libcups2:amd64. Preparing to unpack .../07-libcups2_2.4.1op1-1ubuntu4.1_amd64.deb ... Unpacking libcups2:amd64 (2.4.1op1-1ubuntu4.1) ... Selecting previously unselected package liblcms2-2:amd64. Preparing to unpack .../08-liblcms2-2_2.12~rc1-2build2_amd64.deb ... Unpacking liblcms2-2:amd64 (2.12~rc1-2build2) ... Selecting previously unselected package libjpeg-turbo8:amd64. Preparing to unpack .../09-libjpeg-turbo8_2.1.2-0ubuntu1_amd64.deb ... Unpacking libjpeg-turbo8:amd64 (2.1.2-0ubuntu1) ... Selecting previously unselected package libjpeg8:amd64. Preparing to unpack .../10-libjpeg8_8c-2ubuntu10_amd64.deb ... Unpacking libjpeg8:amd64 (8c-2ubuntu10) ... Selecting previously unselected package libfreetype6:amd64. Preparing to unpack .../11-libfreetype6_2.11.1+dfsg-1ubuntu0.1_amd64.deb ... Unpacking libfreetype6:amd64 (2.11.1+dfsg-1ubuntu0.1) ... Selecting previously unselected package fonts-dejavu-core. Preparing to unpack .../12-fonts-dejavu-core_2.37-2build1_all.deb ... Unpacking fonts-dejavu-core (2.37-2build1) ... Selecting previously unselected package fontconfig-config. 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Unpacking libasound2:amd64 (1.2.6.1-1ubuntu1) ... Selecting previously unselected package libgraphite2-3:amd64. Preparing to unpack .../19-libgraphite2-3_1.3.14-1build2_amd64.deb ... Unpacking libgraphite2-3:amd64 (1.3.14-1build2) ... Selecting previously unselected package libharfbuzz0b:amd64. Preparing to unpack .../20-libharfbuzz0b_2.7.4-1ubuntu3.1_amd64.deb ... Unpacking libharfbuzz0b:amd64 (2.7.4-1ubuntu3.1) ... Selecting previously unselected package libpcsclite1:amd64. Preparing to unpack .../21-libpcsclite1_1.9.5-3_amd64.deb ... Unpacking libpcsclite1:amd64 (1.9.5-3) ... Selecting previously unselected package openjdk-11-jre-headless:amd64. Preparing to unpack .../22-openjdk-11-jre-headless_11.0.15+10-0ubuntu0.22.04.1_amd64.deb ... Unpacking openjdk-11-jre-headless:amd64 (11.0.15+10-0ubuntu0.22.04.1) ... Selecting previously unselected package default-jre-headless. Preparing to unpack .../23-default-jre-headless_2%3a1.11-72build2_amd64.deb ... Unpacking default-jre-headless (2:1.11-72build2) ... Selecting previously unselected package ca-certificates-java. Preparing to unpack .../24-ca-certificates-java_20190909_all.deb ... Unpacking ca-certificates-java (20190909) ... Selecting previously unselected package libjaxen-java. Preparing to unpack .../25-libjaxen-java_1.1.6-4_all.deb ... Unpacking libjaxen-java (1.1.6-4) ... Selecting previously unselected package libdom4j-java. Preparing to unpack .../26-libdom4j-java_2.1.3-1_all.deb ... Unpacking libdom4j-java (2.1.3-1) ... Selecting previously unselected package libicu4j-java. Preparing to unpack .../27-libicu4j-java_68.2-2_all.deb ... Unpacking libicu4j-java (68.2-2) ... Selecting previously unselected package libjetbrains-annotations-java. Preparing to unpack .../28-libjetbrains-annotations-java_23.0.0-1_all.deb ... Unpacking libjetbrains-annotations-java (23.0.0-1) ... Selecting previously unselected package libintellij-annotations-java. 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Unpacking libxom-java (1.3.7+ds-3) ... Selecting previously unselected package libsaxonhe-java. Preparing to unpack .../35-libsaxonhe-java_9.9.1.5+dfsg-1_all.deb ... Unpacking libsaxonhe-java (9.9.1.5+dfsg-1) ... Setting up libgraphite2-3:amd64 (1.3.14-1build2) ... Setting up liblcms2-2:amd64 (2.12~rc1-2build2) ... Setting up libjetbrains-annotations-java (23.0.0-1) ... Setting up libicu4j-java (68.2-2) ... Setting up java-common (0.72build2) ... Setting up libintellij-annotations-java (23.0.0-1) ... Setting up libasound2-data (1.2.6.1-1ubuntu1) ... Setting up libjaxen-java (1.1.6-4) ... Setting up libnspr4:amd64 (2:4.32-3build1) ... Setting up libavahi-common-data:amd64 (0.8-5ubuntu5) ... Setting up libdbus-1-3:amd64 (1.12.20-2ubuntu4) ... Setting up libpng16-16:amd64 (1.6.37-3build5) ... Setting up libxml-commons-resolver1.1-java (1.2-11) ... Setting up fonts-dejavu-core (2.37-2build1) ... Setting up libpcsclite1:amd64 (1.9.5-3) ... Setting up ucf (3.0043) ... debconf: unable to initialize frontend: Dialog debconf: (TERM is not set, so the dialog frontend is not usable.) debconf: falling back to frontend: Readline Setting up libjpeg-turbo8:amd64 (2.1.2-0ubuntu1) ... Setting up libxml-commons-external-java (1.4.01-5) ... Setting up libasound2:amd64 (1.2.6.1-1ubuntu1) ... Setting up libxerces2-java (2.12.1-1) ... Setting up libjpeg8:amd64 (8c-2ubuntu10) ... Setting up libdom4j-java (2.1.3-1) ... Setting up fontconfig-config (2.13.1-4.2ubuntu5) ... Setting up libjdom1-java (1.1.3-2.1) ... Setting up libavahi-common3:amd64 (0.8-5ubuntu5) ... Setting up libnss3:amd64 (2:3.68.2-0ubuntu1.1) ... Setting up libxom-java (1.3.7+ds-3) ... Setting up libfreetype6:amd64 (2.11.1+dfsg-1ubuntu0.1) ... Setting up libharfbuzz0b:amd64 (2.7.4-1ubuntu3.1) ... Setting up libfontconfig1:amd64 (2.13.1-4.2ubuntu5) ... Setting up libavahi-client3:amd64 (0.8-5ubuntu5) ... Setting up libsaxonhe-java (9.9.1.5+dfsg-1) ... Setting up libcups2:amd64 (2.4.1op1-1ubuntu4.1) ... Setting up ca-certificates-java (20190909) ... head: cannot open '/etc/ssl/certs/java/cacerts' for reading: No such file or directory Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem Adding debian:Cybertrust_Global_Root.pem Adding debian:Certigna.pem Adding debian:SZAFIR_ROOT_CA2.pem Adding debian:Go_Daddy_Class_2_CA.pem Adding debian:AffirmTrust_Commercial.pem Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem Adding debian:ePKI_Root_Certification_Authority.pem Adding debian:DigiCert_Assured_ID_Root_G3.pem Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem Adding debian:SwissSign_Silver_CA_-_G2.pem Adding debian:QuoVadis_Root_CA_2.pem Adding debian:AffirmTrust_Networking.pem Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem Adding debian:CFCA_EV_ROOT.pem Adding debian:e-Szigno_Root_CA_2017.pem Adding debian:SecureTrust_CA.pem Adding debian:DigiCert_Trusted_Root_G4.pem Adding debian:AffirmTrust_Premium.pem Adding debian:GlobalSign_Root_CA.pem Adding debian:Entrust_Root_Certification_Authority.pem Adding debian:DigiCert_Global_Root_G2.pem Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem Adding debian:QuoVadis_Root_CA_3_G3.pem Adding debian:QuoVadis_Root_CA_3.pem Adding debian:XRamp_Global_CA_Root.pem Adding debian:TrustCor_RootCert_CA-1.pem Adding debian:Baltimore_CyberTrust_Root.pem Adding debian:TeliaSonera_Root_CA_v1.pem Adding debian:CA_Disig_Root_R2.pem Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2011.pem Adding debian:Starfield_Class_2_CA.pem Adding debian:Certum_Trusted_Network_CA.pem Adding debian:T-TeleSec_GlobalRoot_Class_3.pem Adding debian:USERTrust_ECC_Certification_Authority.pem Adding debian:Trustwave_Global_ECC_P384_Certification_Authority.pem Adding debian:Trustwave_Global_Certification_Authority.pem Adding debian:certSIGN_ROOT_CA.pem Adding debian:SSL.com_Root_Certification_Authority_RSA.pem Adding debian:GTS_Root_R4.pem Adding debian:SSL.com_Root_Certification_Authority_ECC.pem Adding debian:AC_RAIZ_FNMT-RCM.pem Adding debian:Secure_Global_CA.pem Adding debian:emSign_ECC_Root_CA_-_G3.pem Adding debian:GTS_Root_R3.pem Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem Adding debian:Entrust_Root_Certification_Authority_-_G2.pem Adding debian:Microsec_e-Szigno_Root_CA_2009.pem Adding debian:SwissSign_Gold_CA_-_G2.pem Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem Adding debian:E-Tugra_Certification_Authority.pem Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem Adding debian:GlobalSign_Root_CA_-_R2.pem Adding debian:GlobalSign_Root_E46.pem Adding debian:Actalis_Authentication_Root_CA.pem Adding debian:GTS_Root_R2.pem Adding debian:DigiCert_Assured_ID_Root_CA.pem Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem Adding debian:Certum_Trusted_Network_CA_2.pem Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem Adding debian:Certum_EC-384_CA.pem Adding debian:GDCA_TrustAUTH_R5_ROOT.pem Adding debian:GlobalSign_Root_CA_-_R3.pem Adding debian:Microsoft_RSA_Root_Certificate_Authority_2017.pem Adding debian:emSign_ECC_Root_CA_-_C3.pem Adding debian:emSign_Root_CA_-_C1.pem Adding debian:COMODO_Certification_Authority.pem Adding debian:Certigna_Root_CA.pem Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem Adding debian:Amazon_Root_CA_4.pem Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem Adding debian:TWCA_Root_Certification_Authority.pem Adding debian:T-TeleSec_GlobalRoot_Class_2.pem Adding debian:emSign_Root_CA_-_G1.pem Adding debian:Buypass_Class_2_Root_CA.pem Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem Adding debian:Amazon_Root_CA_1.pem Adding debian:IdenTrust_Commercial_Root_CA_1.pem Adding debian:Hongkong_Post_Root_CA_3.pem Adding debian:TrustCor_ECA-1.pem Adding debian:DigiCert_Assured_ID_Root_G2.pem Adding debian:Trustwave_Global_ECC_P256_Certification_Authority.pem Adding debian:Izenpe.com.pem Adding debian:COMODO_RSA_Certification_Authority.pem Adding debian:Hongkong_Post_Root_CA_1.pem Adding debian:SecureSign_RootCA11.pem Adding debian:Security_Communication_Root_CA.pem Adding debian:ACCVRAIZ1.pem Adding debian:Certum_Trusted_Root_CA.pem Adding debian:Network_Solutions_Certificate_Authority.pem Adding debian:DigiCert_Global_Root_G3.pem Adding debian:USERTrust_RSA_Certification_Authority.pem Adding debian:Staat_der_Nederlanden_EV_Root_CA.pem Adding debian:ISRG_Root_X1.pem Adding debian:Atos_TrustedRoot_2011.pem Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem Adding debian:COMODO_ECC_Certification_Authority.pem Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem Adding debian:Security_Communication_RootCA2.pem Adding debian:certSIGN_Root_CA_G2.pem Adding debian:AC_RAIZ_FNMT-RCM_SERVIDORES_SEGUROS.pem Adding debian:GlobalSign_Root_R46.pem Adding debian:QuoVadis_Root_CA_1_G3.pem Adding debian:UCA_Global_G2_Root.pem Adding debian:Buypass_Class_3_Root_CA.pem Adding debian:AffirmTrust_Premium_ECC.pem Adding debian:Entrust_Root_Certification_Authority_-_G4.pem Adding debian:Amazon_Root_CA_3.pem Adding debian:GTS_Root_R1.pem Adding debian:UCA_Extended_Validation_Root.pem Adding debian:Amazon_Root_CA_2.pem Adding debian:DigiCert_Global_Root_CA.pem Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem Adding debian:QuoVadis_Root_CA_2_G3.pem Adding debian:GLOBALTRUST_2020.pem Adding debian:Comodo_AAA_Services_root.pem Adding debian:EC-ACC.pem Adding debian:TWCA_Global_Root_CA.pem Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem Adding debian:Microsoft_ECC_Root_Certificate_Authority_2017.pem Adding debian:GlobalSign_Root_CA_-_R6.pem Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem Adding debian:NAVER_Global_Root_Certification_Authority.pem Adding debian:ANF_Secure_Server_Root_CA.pem Adding debian:TrustCor_RootCert_CA-2.pem done. Setting up default-jre-headless (2:1.11-72build2) ... Processing triggers for libc-bin (2.35-0ubuntu3) ... Processing triggers for ca-certificates (20211016) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. done. Setting up openjdk-11-jre-headless:amd64 (11.0.15+10-0ubuntu0.22.04.1) ... update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/java to provide /usr/bin/java (java) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jjs to provide /usr/bin/jjs (jjs) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/rmid to provide /usr/bin/rmid (rmid) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/pack200 to provide /usr/bin/pack200 (pack200) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/unpack200 to provide /usr/bin/unpack200 (unpack200) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode ========== Generating Manual ========== CP2K version 2022.1 (Development Version) Source code revision git:a713c85 cp2kflags: omp libint fftw3 libxc pexsi elpa parallel mpi3 scalapack cosma quip xsmm plumed2 spglib sirius libvori libbqb compiler: GCC version 11.2.0 compiler options: -cpp -I /opt/cp2k-toolchain/install/mpich-3.4.3/include -I /opt/cp2k -toolchain/install/openblas-0.3.20/include -I /opt/cp2k-toolchain/in stall/fftw-3.3.10/include -I /opt/cp2k-toolchain/install/libint-v2.6 .0-cp2k-lmax-5/include -I /opt/cp2k-toolchain/install/libxc-5.2.3/in clude -I /opt/cp2k-toolchain/install/libxsmm-1.17/include -I /opt/cp 2k-toolchain/install/COSMA-2.6.0/include -I /opt/cp2k-toolchain/inst all/elpa-2021.11.002/cpu/include/elpa_openmp-2021.11.002/modules -I /opt/cp2k-toolchain/install/elpa-2021.11.002/cpu/include/elpa_openmp -2021.11.002/elpa -I /opt/cp2k-toolchain/install/scotch-6.0.0/includ e -I /opt/cp2k-toolchain/install/superlu_dist-6.1.0/include -I /opt/ cp2k-toolchain/install/pexsi-1.2.0/include -I /opt/cp2k-toolchain/in stall/quip-b4336484fb65b0e73211a8f920ae4361c7c353fd/include -I /opt/ cp2k-toolchain/install/gsl-2.7/include -I /opt/cp2k-toolchain/instal l/hdf5-1.12.0/include -I /opt/cp2k-toolchain/install/libvdwxc-0.4.0/ include -I /opt/cp2k-toolchain/install/spglib-1.16.2/include -I /opt /cp2k-toolchain/install/SpFFT-1.0.6/include -I /opt/cp2k-toolchain/i nstall/SpLA-1.5.4/include/spla -I /opt/cp2k-toolchain/install/sirius -7.3.1/include -I /opt/cp2k/src/start/ -I /opt/cp2k/obj/local/psmp/e xts/dbcsr -I /opt/cp2k-toolchain/install/mpich-3.4.3/include -I /opt /cp2k-toolchain/install/mpich-3.4.3/include -imultiarch x86_64-linux -gnu -D_REENTRANT -D __LIBXSMM -D __parallel -D __FFTW3 -D __LIBINT -D __LIBXC -D __SCALAPACK -D __COSMA -D __ELPA -D __LIBPEXSI -D __QU IP -D __GSL -D __PLUMED2 -D __HDF5 -D __LIBVDWXC -D __SPGLIB -D __LI BVORI -D __SPFFT -D __SPLA -D __SIRIUS -D __COMPILE_ARCH="local" -D __COMPILE_DATE="Fri Jul 22 11:13:28 UTC 2022" -D __COMPILE_HOST="bf9 870f96994" -D __COMPILE_REVISION="git:a713c85" -D __DATA_DIR="/opt/c p2k/data" -D __SHORT_FILE__="start/cp2k.F" -march=znver2 -mmmx -mpop cnt -msse -msse2 -msse3 -mssse3 -msse4.1 -msse4.2 -mavx -mavx2 -msse 4a -mno-fma4 -mno-xop -mfma -mno-avx512f -mbmi -mbmi2 -maes -mpclmul -mno-avx512vl -mno-avx512bw -mno-avx512dq -mno-avx512cd -mno-avx512 er -mno-avx512pf -mno-avx512vbmi -mno-avx512ifma -mno-avx5124vnniw - mno-avx5124fmaps -mno-avx512vpopcntdq -mno-avx512vbmi2 -mno-gfni -mn o-vpclmulqdq -mno-avx512vnni -mno-avx512bitalg -mno-avx512bf16 -mno- avx512vp2intersect -mno-3dnow -madx -mabm -mno-cldemote -mclflushopt -mclwb -mclzero -mcx16 -mno-enqcmd -mf16c -mfsgsbase -mfxsr -mno-hl e -msahf -mno-lwp -mlzcnt -mmovbe -mno-movdir64b -mno-movdiri -mno-m waitx -mno-pconfig -mno-pku -mno-prefetchwt1 -mprfchw -mno-ptwrite - mrdpid -mrdrnd -mrdseed -mno-rtm -mno-serialize -mno-sgx -msha -mno- shstk -mno-tbm -mno-tsxldtrk -mno-vaes -mno-waitpkg -mno-wbnoinvd -m xsave -mxsavec -mxsaveopt -mno-xsaves -mno-amx-tile -mno-amx-int8 -m no-amx-bf16 -mno-uintr -mno-hreset -mno-kl -mno-widekl -mno-avxvnni --param=l1-cache-size=32 --param=l1-cache-line-size=64 --param=l2-ca che-size=512 -mtune=znver2 -g -g -O2 -O3 -Werror=aliasing -Werror=am persand -Werror=c-binding-type -Werror=intrinsic-shadow -Werror=intr insics-std -Werror=line-truncation -Werror=tabs -Werror=target-lifet ime -Werror=underflow -Werror=unused-but-set-variable -Werror=unused -variable -Werror=unused-dummy-argument -Werror=conversion -Werror=z erotrip -Wno-maybe-uninitialized -Wuninitialized -Wuse-without-only -std=f2008 -fPIC -fno-omit-frame-pointer -fopenmp -funroll-loops -fb acktrace -ffree-form -fimplicit-none -fallow-argument-mismatch -fpre -include=/usr/include/finclude/math-vector-fortran.h Summary: Manual generation works fine. Status: OK Removing intermediate container dabc6d38da05 ---> bae38eb1ea1d Step 43/44 : CMD cat $(find ./report.log -mmin +10) | sed '/^Summary:/ s/$/ (cached)/' ---> Running in 2101c5eb4e88 Removing intermediate container 2101c5eb4e88 ---> 3480417f9127 Step 44/44 : ENTRYPOINT [] ---> Running in 42588e31bd93 Removing intermediate container 42588e31bd93 ---> fb16982cf42f Successfully built fb16982cf42f Successfully tagged gcr.io/cp2k-org-project/img_cp2k-manual-arch-668:master Pushing new image... done. #################### Running Image cp2k-manual #################### Uploading artifacts... done EndDate: 2022-07-22 11:16:33+00:00