#!/bin/bash -l
for d in $(seq 16 1 20); do
  mkdir $d
  cp deca_ala/* $d/.
  cd $d
  sed -e "s|14.37|${d}|" md_std.inp > d_${d}.inp
  cp2k.sopt -i d_${d}.inp -o d_${d}.out 
  cd ..
done