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exercises:2014_ethz_mmm:nudged_elastic_band

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exercise:nudged_elastic_band [2014/02/21 11:41] – [Path 1: direct exchange] oschuettexercise:2014_ethz_mmm:nudged_elastic_band [2014/10/15 13:38] oschuett
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 ^  Path 1  ^  Path 2  ^ ^  Path 1  ^  Path 2  ^
 |  Direct exchange with the central atom  |  Coordinated rotation of three atoms  | |  Direct exchange with the central atom  |  Coordinated rotation of three atoms  |
-|  {{:exercise:neb_path1.gif|}}  |  {{:exercise:neb_path2.gif|}}  |+|  {{neb_path1.gif|}}  |  {{neb_path2.gif|}}  |
  
  
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 For the NEB calcualtions, CP2k produces a few output files. The most important are: For the NEB calcualtions, CP2k produces a few output files. The most important are:
  
-  * neb1.out : standard CP2K output file. It tells you whether that the calculation is completed.\\ (See:[[exercise:single_point_calculation|Computation of the Lennard Jones curve for two Ar atoms]].Part I, Step 3)+  * neb1.out : standard CP2K output file. It tells you whether that the calculation is completed.\\ (See:[[single_point_calculation|Computation of the Lennard Jones curve for two Ar atoms]].Part I, Step 3)
   * neb1-pos-Replica_nr_XXX-1.xyz : those are the replica optimization trajectories. You get a trajectory for each replica.    * neb1-pos-Replica_nr_XXX-1.xyz : those are the replica optimization trajectories. You get a trajectory for each replica. 
   * neb1-BANDXXX.out : geometry optimization output for each replica.   * neb1-BANDXXX.out : geometry optimization output for each replica.
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 <code> <code>
-$ echo "plot 'energy_profile' w l; pause mouse" |  gnuplot+$ echo "plot 'neb1_profile' w l; pause mouse" |  gnuplot
 </code> </code>
  
exercises/2014_ethz_mmm/nudged_elastic_band.txt · Last modified: 2020/08/21 10:15 by 127.0.0.1