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exercises:2014_uzh_molsim:nacl_free_energy

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exercise:mm_uzh:nacl_free_energy [2014/05/19 22:34] talirzexercise:mm_uzh:nacl_free_energy [2014/06/30 11:25] talirz
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 <note>**TASK 4** <note>**TASK 4**
-  - In the [[http://cp2k.org/exercise:mm_uzh:h2o_md|previous exercise]], we computed the O-O radial distribution function for water with reasonable statistics using just 20 ps of simulated time. Give at least one reason, why collecting enough statistics for the Na-Cl radial distribution function requires much longer simulation times (with our setup).+  - In the [[http://cp2k.org/exercise:mm_uzh:h2o_md|previous exercise]], we computed the O-O radial distribution function for water with acceptable statistics using just 20 ps of simulated time. Give two reasons, why collecting enough statistics for the Na-Cl radial distribution function requires much longer simulation times (with our setup).
   - Compute the radial distribution function for the provided trajectory and plot it as a function of Na-Cl distance.   - Compute the radial distribution function for the provided trajectory and plot it as a function of Na-Cl distance.
   - Use the equations above to compute the free energy profile. Does it agree with the one constructed from the Shake Lagrange multipliers?   - Use the equations above to compute the free energy profile. Does it agree with the one constructed from the Shake Lagrange multipliers?
 </note> </note>
exercises/2014_uzh_molsim/nacl_free_energy.txt · Last modified: 2020/08/21 10:15 by 127.0.0.1