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exercises:2016_uzh_cmest:geometry_optimization

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exercises:2016_uzh_cmest:geometry_optimization [2016/10/12 11:15] – [1. Step: Single point energy calculation with separate coordinate file] tmuellerexercises:2016_uzh_cmest:geometry_optimization [2016/10/12 11:16] – [3. Step: Optimizing the geometry with alternative geometry] tmueller
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-===== 3. Step: Optimizing the geometry with alternative geometry =====+===== 3. Step: Optimizing the geometry with an alternative geometry =====
  
 Now change the used coordinate file to ''ethane2.xyz'' and update the ''PROJECT'' name to not overwrite the results from the previous simulation and run it again. Now change the used coordinate file to ''ethane2.xyz'' and update the ''PROJECT'' name to not overwrite the results from the previous simulation and run it again.
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 </code> </code>
  
-Open this new XYZ file again with VMD, choose an appropriate drawing method (//Licorice// or //CPK//and hit the play button:+Open this new XYZ file again with VMD, choose an appropriate drawing method (//Licorice// or //CPK//)hit the play button and enjoy:
  
 {{ vmd_play.png |}} {{ vmd_play.png |}}
  
exercises/2016_uzh_cmest/geometry_optimization.txt · Last modified: 2020/08/21 10:15 by 127.0.0.1