CP2K Open Source Molecular Dynamics

User Tools

Site Tools

Trace:
exercises:2017_uzh_cp2k-tutorial:hybrid

Differences

This shows you the differences between two versions of the page.

Link to this comparison view

Both sides previous revisionPrevious revision
Next revision		Previous revision
exercises:2017_uzh_cp2k-tutorial:hybrid [2017/07/11 23:37] – gtocciexercises:2017_uzh_cp2k-tutorial:hybrid [2020/08/21 10:15] (current) – external edit 127.0.0.1
Line 10: Line 10:
  
 <note> <note>
-Tutorial re-adapted from [[https://www.cp2k.org/exercises:2016_summer_school:hfx]] +Tutorial re-adapted from the [[https://www.cp2k.org/exercises:2016_summer_school:hfx| Tutorial on HFX and ADMM 2016 at KCL]] 
-For more info see also the slides from Joost VandeVondele [[https://www.cecam.org/upload/talk/presentation_5766.pdf]] +For more info see also the slides from Joost VandeVondele [[pdf>https://www.cecam.org/upload/talk/presentation_5766.pdf| presentation 2011]], Sanliang Ling [[pdf>https://www.cp2k.org/_media/events:2016_user_meeting:cp2k-uk-2016-ling.pdf | presentation 2016]] and 
-and Sanliang Ling [[https://www.cp2k.org/_media/events:2016_user_meeting:cp2k-uk-2016-ling.pdf]]+Matt Watkins [[https://mattatlincoln.github.io/cp2k_workshop_2017 | presentation 2017]]
 </note> </note>
  
Line 31: Line 31:
    ! various runtypes (energy, geo_opt, etc.) available.    ! various runtypes (energy, geo_opt, etc.) available.
    RUN_TYPE ENERGY    RUN_TYPE ENERGY
-   ! limit the runs to 5min +   ! amount of information printed to output
-   WALLTIME 1800 +
-   ! reduce the amount of IO+
    IOLEVEL  MEDIUM    IOLEVEL  MEDIUM
 &END GLOBAL &END GLOBAL
Line 88: Line 86:
          SCF_GUESS ATOMIC ! can be used to RESTART an interrupted calculation          SCF_GUESS ATOMIC ! can be used to RESTART an interrupted calculation
          MAX_SCF 30          MAX_SCF 30
-         EPS_SCF 1.0E-6 ! accuracy of the SCF procedure typically 1.0E-6 - 1.0E-7+         EPS_SCF 1.0E-6 ! accuracy of the SCF procedure, for OT typically 1.0E-6 - 1.0E-7, for diagonalization may have to be smaller
          &OT          &OT
             ! an accurate preconditioner suitable also for larger systems             ! an accurate preconditioner suitable also for larger systems
Line 188: Line 186:
           ! important parameter to get stable HFX calcs (contributions to hfx smaller than EPS_SCHWARZ are not considered)           ! important parameter to get stable HFX calcs (contributions to hfx smaller than EPS_SCHWARZ are not considered)
           EPS_SCHWARZ 1.0E-6           EPS_SCHWARZ 1.0E-6
-          ! needs a good (GGA) initial guess (screening on density matrix elements)+          ! needs a good (GGA) initial guess  
 +          ! screening on the product between maximum of density matrix elements and ERI
           SCREEN_ON_INITIAL_P TRUE           SCREEN_ON_INITIAL_P TRUE
         &END         &END
Line 194: Line 193:
           ! for condensed phase systems           ! for condensed phase systems
           POTENTIAL_TYPE TRUNCATED           POTENTIAL_TYPE TRUNCATED
-          ! should be less than halve the cell +          ! should be less than half the cell 
-          CUTOFF_RADIUS  2.5+          CUTOFF_RADIUS  6.0
           ! data file needed with the truncated operator           ! data file needed with the truncated operator
           T_C_G_DATA ./t_c_g.dat           T_C_G_DATA ./t_c_g.dat
Line 274: Line 273:
   * Look at the output where the HOMO-LUMO gap has been printed out. How does this compare to the GGA result?    * Look at the output where the HOMO-LUMO gap has been printed out. How does this compare to the GGA result? 
   * Adjust the fraction of exchange (modify the input in two places!) to 20% and/or 30%, how does this influence the gap ?   * Adjust the fraction of exchange (modify the input in two places!) to 20% and/or 30%, how does this influence the gap ?
-  * Most of the time in the SCF cycle is spent in the first step, while the other steps are much faster. Why do you think is that?+  * The most expensive part of the whole SCF cycle is represented by the first step, while the other steps are much faster. Why is that?
   * __Optional__ You can check if the SCF cycle is stable by decreasing the values of ''EPS_PGF_ORB'', ''EPS_FILTER_MATRIX'' as well as ''EPS_SCHWARZ''. Re-run the calculation and see how this affects the ''ENERGY''.   * __Optional__ You can check if the SCF cycle is stable by decreasing the values of ''EPS_PGF_ORB'', ''EPS_FILTER_MATRIX'' as well as ''EPS_SCHWARZ''. Re-run the calculation and see how this affects the ''ENERGY''.
   * __Optional__ CP2K tries to store the ERI in-core and avoid to calculate them at each SCF step. Especially for large systems that can be run on large HCP machines it is important to run in-core operation and fit the calculations of the ERI into memory. To see the effect of not having enough memory on the time for the ''SCF'' cycle, modify the tag of ''MAX_MEMORY'' to 40 and rerun the calculation. How do the timings compare with those where ''MAX_MEMORY'' was larger?   * __Optional__ CP2K tries to store the ERI in-core and avoid to calculate them at each SCF step. Especially for large systems that can be run on large HCP machines it is important to run in-core operation and fit the calculations of the ERI into memory. To see the effect of not having enough memory on the time for the ''SCF'' cycle, modify the tag of ''MAX_MEMORY'' to 40 and rerun the calculation. How do the timings compare with those where ''MAX_MEMORY'' was larger?
Line 301: Line 300:
 Rerun the single point energy calculation and note the band gap.  Rerun the single point energy calculation and note the band gap. 
   * Is such a short range sufficient to have a sizable effect on the band gap ?   * Is such a short range sufficient to have a sizable effect on the band gap ?
-  * is ''HFX_MEM_INFO| Number of cart. primitive ERI's calculated'' very different for calculations with 2.5 and 6.0A truncation radius?+  * is ''HFX_MEM_INFO| Number of cart. primitive ERI's calculated'' very different for calculations with 2.5 and 6.0A truncation radius? Remember to use the same cutoff radius under the ''&PBE_HOLE_T_C_LR'' and ''&INTERACTION_POTENTIAL'' sections.
  
 ===== Auxiliary Density Matrix Methods (ADMM) ===== ===== Auxiliary Density Matrix Methods (ADMM) =====
Line 364: Line 363:
   RUN_TYPE ENERGY   RUN_TYPE ENERGY
   ! limit the runs to 30min   ! limit the runs to 30min
-  WALLTIME 1800+  WALLTIME 1800 
   ! reduce the amount of IO   ! reduce the amount of IO
   IOLEVEL  MEDIUM    IOLEVEL  MEDIUM 
Line 380: Line 379:
  
     ! Charge and multiplicity     ! Charge and multiplicity
-    CHARGE 0 +    CHARGE 1 
-    MULTIPLICITY 1+    MULTIPLICITY 2
  
     &MGRID     &MGRID
exercises/2017_uzh_cp2k-tutorial/hybrid.1499816269.txt.gz · Last modified: 2020/08/21 10:15 (external edit)