exercises:2018_uzh_acpc2:installation
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exercises:2018_uzh_acpc2:installation [2018/04/16 15:11] – [First CP2K simulation] gtocci | exercises:2018_uzh_acpc2:installation [2020/08/21 10:15] (current) – external edit 127.0.0.1 | ||
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===== 0.1b Installation of XCode and XQuartz | ===== 0.1b Installation of XCode and XQuartz | ||
- | You need to use an X11 server. Download and install [[https:// | + | If you are running on a Mac OS X you need to install XCode and XQuartz. |
+ | |||
+ | Download and install [[https:// | ||
Also, you need to install XCode from the apple store or from the following link: [[https:// | Also, you need to install XCode from the apple store or from the following link: [[https:// | ||
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===== 0.2b CP2K Installation on Mac OS X ===== | ===== 0.2b CP2K Installation on Mac OS X ===== | ||
- | Visit [[http:// | + | Visit [[http:// |
Unpack the compressed '' | Unpack the compressed '' | ||
< | < | ||
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If you find '' | If you find '' | ||
- | =====0.3 First CP2K simulation ===== | + | ===== 0.3 First CP2K simulation ===== |
- | It is possible to run cp2k from any directory your own machine by adding a line to your '' | + | It is possible to run cp2k from any directory |
- | To do this go to the directory where the binary is located and type '' | + | To do this change |
To edit the '' | To edit the '' | ||
< | < | ||
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You just ran a short Molecular Dynamics trajectory of liquid argon. | You just ran a short Molecular Dynamics trajectory of liquid argon. | ||
- | ===== Visualization with VMD ===== | + | |
+ | ===== 0.4 Visualization with VMD ===== | ||
We will visualize this trajectory with VMD, a molecular visualization program. First of all, download and install VMD for your operating system as indicated [[http:// | We will visualize this trajectory with VMD, a molecular visualization program. First of all, download and install VMD for your operating system as indicated [[http:// | ||
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{{: | {{: | ||
- | ===== Plotting tools ===== | + | |
+ | ===== 0.5 Plotting tools ===== | ||
Throughout the course you will also need to plot some graphs. You can use any tool you like for that. '' | Throughout the course you will also need to plot some graphs. You can use any tool you like for that. '' | ||
exercises/2018_uzh_acpc2/installation.1523891473.txt.gz · Last modified: 2020/08/21 10:15 (external edit)