LCOV - code coverage report
Current view: top level - src/motion/thermostat - al_system_init.F (source / functions) Coverage Total Hit
Test: CP2K Regtests (git:42dac4a) Lines: 63.9 % 36 23
Test Date: 2025-07-25 12:55:17 Functions: 100.0 % 3 3

            Line data    Source code
       1              : !--------------------------------------------------------------------------------------------------!
       2              : !   CP2K: A general program to perform molecular dynamics simulations                              !
       3              : !   Copyright 2000-2025 CP2K developers group <https://cp2k.org>                                   !
       4              : !                                                                                                  !
       5              : !   SPDX-License-Identifier: GPL-2.0-or-later                                                      !
       6              : !--------------------------------------------------------------------------------------------------!
       7              : 
       8              : ! **************************************************************************************************
       9              : !> \author Noam Bernstein [noamb] 02.2012
      10              : ! **************************************************************************************************
      11              : MODULE al_system_init
      12              : 
      13              :    USE al_system_mapping,               ONLY: al_to_particle_mapping
      14              :    USE al_system_types,                 ONLY: al_system_type
      15              :    USE distribution_1d_types,           ONLY: distribution_1d_type
      16              :    USE input_section_types,             ONLY: section_vals_get,&
      17              :                                               section_vals_get_subs_vals,&
      18              :                                               section_vals_type,&
      19              :                                               section_vals_val_get
      20              :    USE kinds,                           ONLY: dp
      21              :    USE message_passing,                 ONLY: mp_para_env_type
      22              :    USE molecule_kind_types,             ONLY: molecule_kind_type
      23              :    USE molecule_types,                  ONLY: global_constraint_type,&
      24              :                                               molecule_type
      25              :    USE simpar_types,                    ONLY: simpar_type
      26              :    USE thermostat_types,                ONLY: thermostat_info_type
      27              : #include "../../base/base_uses.f90"
      28              : 
      29              :    IMPLICIT NONE
      30              : 
      31              :    PRIVATE
      32              :    PUBLIC :: initialize_al_part
      33              : 
      34              :    CHARACTER(len=*), PARAMETER, PRIVATE :: moduleN = 'al_system_init'
      35              : 
      36              : CONTAINS
      37              : 
      38              : ! **************************************************************************************************
      39              : !> \brief ...
      40              : !> \param thermostat_info ...
      41              : !> \param simpar ...
      42              : !> \param local_molecules ...
      43              : !> \param molecule ...
      44              : !> \param molecule_kind_set ...
      45              : !> \param para_env ...
      46              : !> \param al ...
      47              : !> \param al_section ...
      48              : !> \param gci ...
      49              : !> \author Noam Bernstein [noamb] 02.2012
      50              : ! **************************************************************************************************
      51            4 :    SUBROUTINE initialize_al_part(thermostat_info, simpar, local_molecules, &
      52              :                                  molecule, molecule_kind_set, para_env, al, al_section, &
      53              :                                  gci)
      54              : 
      55              :       TYPE(thermostat_info_type), POINTER                :: thermostat_info
      56              :       TYPE(simpar_type), POINTER                         :: simpar
      57              :       TYPE(distribution_1d_type), POINTER                :: local_molecules
      58              :       TYPE(molecule_type), POINTER                       :: molecule(:)
      59              :       TYPE(molecule_kind_type), POINTER                  :: molecule_kind_set(:)
      60              :       TYPE(mp_para_env_type), POINTER                    :: para_env
      61              :       TYPE(al_system_type), POINTER                      :: al
      62              :       TYPE(section_vals_type), POINTER                   :: al_section
      63              :       TYPE(global_constraint_type), POINTER              :: gci
      64              : 
      65              :       LOGICAL                                            :: restart
      66              : 
      67            4 :       restart = .FALSE.
      68              :       CALL al_to_particle_mapping(thermostat_info, simpar, local_molecules, &
      69            4 :                                   molecule, molecule_kind_set, al, para_env, gci)
      70              : 
      71            4 :       CALL restart_al(al, al_section, restart)
      72              : 
      73            4 :       IF (.NOT. restart) THEN
      74            4 :          CALL init_al_variables(al)
      75              :       END IF
      76              : 
      77            4 :    END SUBROUTINE initialize_al_part
      78              : 
      79              : ! **************************************************************************************************
      80              : !> \brief ...
      81              : !> \param al ...
      82              : ! **************************************************************************************************
      83            4 :    SUBROUTINE init_al_variables(al)
      84              :       TYPE(al_system_type), POINTER                      :: al
      85              : 
      86        49597 :       al%nvt(:)%mass = al%nvt(:)%nkt*al%tau_nh**2
      87        49597 :       al%nvt(:)%chi = 0.0_dp
      88            4 :    END SUBROUTINE init_al_variables
      89              : 
      90              : ! **************************************************************************************************
      91              : !> \brief ...
      92              : !> \param al ...
      93              : !> \param al_section ...
      94              : !> \param restart ...
      95              : !> \author Noam Bernstein [noamb] 02.2012
      96              : ! **************************************************************************************************
      97           12 :    SUBROUTINE restart_al(al, al_section, restart)
      98              :       TYPE(al_system_type), POINTER                      :: al
      99              :       TYPE(section_vals_type), POINTER                   :: al_section
     100              :       LOGICAL, INTENT(inout)                             :: restart
     101              : 
     102              :       INTEGER                                            :: i, my_index, n_rep
     103              :       LOGICAL                                            :: explicit
     104              :       TYPE(section_vals_type), POINTER                   :: work_section
     105              : 
     106            4 :       restart = .FALSE.
     107              : 
     108              :       ! Possibly restart the initial thermostat DOF value
     109              :       work_section => section_vals_get_subs_vals(section_vals=al_section, &
     110            4 :                                                  subsection_name="CHI")
     111            4 :       CALL section_vals_get(work_section, explicit=explicit)
     112            4 :       restart = explicit
     113            4 :       IF (explicit) THEN
     114              :          CALL section_vals_val_get(section_vals=work_section, keyword_name="_DEFAULT_KEYWORD_", &
     115            0 :                                    n_rep_val=n_rep)
     116            0 :          IF (n_rep == al%glob_num_al) THEN
     117            0 :             DO i = 1, al%loc_num_al
     118            0 :                my_index = al%map_info%index(i)
     119              :                CALL section_vals_val_get(section_vals=work_section, keyword_name="_DEFAULT_KEYWORD_", &
     120            0 :                                          i_rep_val=my_index, r_val=al%nvt(i)%chi)
     121              :             END DO
     122              :          ELSE
     123              :             CALL cp_abort(__LOCATION__, &
     124              :                           'Number pf restartable stream not equal to the number of'// &
     125            0 :                           ' total thermostats!')
     126              :          END IF
     127              :       END IF
     128              : 
     129              :       ! Possibly restart the initial thermostat mass
     130              :       work_section => section_vals_get_subs_vals(section_vals=al_section, &
     131            4 :                                                  subsection_name="MASS")
     132            4 :       CALL section_vals_get(work_section, explicit=explicit)
     133            4 :       IF (restart .NEQV. explicit) &
     134              :          CALL cp_abort(__LOCATION__, &
     135            0 :                        "You need to define both CHI and MASS sections (or none) in the AD_LANGEVIN section")
     136            4 :       restart = restart .AND. explicit
     137            4 :       IF (explicit) THEN
     138              :          CALL section_vals_val_get(section_vals=work_section, keyword_name="_DEFAULT_KEYWORD_", &
     139            0 :                                    n_rep_val=n_rep)
     140            0 :          IF (n_rep == al%glob_num_al) THEN
     141            0 :             DO i = 1, al%loc_num_al
     142            0 :                my_index = al%map_info%index(i)
     143              :                CALL section_vals_val_get(section_vals=work_section, keyword_name="_DEFAULT_KEYWORD_", &
     144            0 :                                          i_rep_val=my_index, r_val=al%nvt(i)%mass)
     145              :             END DO
     146              :          ELSE
     147              :             CALL cp_abort(__LOCATION__, &
     148              :                           'Number pf restartable stream not equal to the number of'// &
     149            0 :                           ' total thermostats!')
     150              :          END IF
     151              :       END IF
     152              : 
     153            4 :    END SUBROUTINE restart_al
     154              : 
     155              : END MODULE al_system_init
        

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